AAAGAACCATGATTTTAGAGG 0 70 +/- 8% - 21 21 chr2_5614 0 0 yes - - - - uuuuuuaucaugucuuugg aaagaaccaugauuuuagagggaccuaaaacucauuuuuuaucaugucuuugg
AAAGAACCATGATTTTAGAGGGCC 1.6 85 +/- 8% - 19 19 chr2_3546 0 0 yes - - - - ccuucuaaaaucauuauucuuugg aaagaaccaugauuuuagagggccuaaaacuaauuuuuacauagucuuagguccuucuaaaaucauuauucuuugg
AAGAACTAAGAGCTCCATGTCAGC 0.7 70 +/- 8% - 301 301 chr2_6278 0 0 yes - - - - aauuauuaguucuuaguucuuaa aagaacuaagagcuccaugucagcaccuccaaugguaaaauuauuaguucuuaguucuuaa
AAGTGTTGTGGTATCGTAGCAAGC 0.9 70 +/- 8% - 102 102 chr2_8279 0 0 yes - - - - uagcuaugagcccacuuau aaguguugugguaucguagcaagcaccuuguuuauaugcguauagguauagguacuagcuaugagcccacuuau
AATTTGGGAGGAATGGGATGGAGC 0.9 70 +/- 8% - 11 11 chr2_1189 0 0 yes - - - - uccauuacuuucccccauuuuugu uccauuacuuucccccauuuuuguuuccccucaauuugggaggaaugggauggagc
ACAATGTTATCCTATCCTGCTGGC 1 85 +/- 8% - 30 27 chr2_9927 3 0 yes - - - - cagcaggauaagauuacugcuauccua acaauguuauccuauccugcuggcgcaacaaacaacauauuacagcaggauaagauuacugcuauccua
ACCAGGCTCTGATACCATGA 1.2 85 +/- 8% - 156 156 chr2_2379 0 0 yes - - - - augguaucauaaccugcuuc augguaucauaaccugcuucacuuaguggucuuguguucaaauacugcucaagcacauggugaaccaggcucugauaccauga
ACGGAAATCGATGAATGAATTTAG 1.8 85 +/- 8% - 29 29 chr2_3766 0 0 yes - - - - aaauucauuucuggauuuccgugu acggaaaucgaugaaugaauuuagaccaagguuaaaaacaaauucauuucuggauuuccgugu
ACTTTTCACATCGGTTCAGTCAGC 2 44 +/- 34% - 67 54 chr2_12561 13 0 yes - - - - caaccaaccgaugugaaaaguau acuuuucacaucgguucagucagccaaccgaugugaaauguauaccuuucacaucgguucagucaaccaaccgaugugaaaaguau
AGAGTTTGGTAGAGCTTAGATAGA 0 70 +/- 8% - 15 15 chr2_4851 0 0 yes - - - - uaaauaggcucauucugaaccuug uaaauaggcucauucugaaccuuguuaaagagaguuugguagagcuuagauaga
AGGACCGAAGAGAGAGGGAAGCAC 0.1 70 +/- 8% - 57 56 chr2_6002 1 0 yes - - - - ucuucuacccucuuccuccuua aggaccgaagagagagggaagcacaugaguugcacgugagaccugcaacggucaucuucuacccucuuccuccuua
AGGATTTAAGCAACTCATAAGCAA 1.6 85 +/- 8% - 916 916 chr2_315 0 0 yes - - - - gcuaguuggguugcuuaaaugcuau gcuaguuggguugcuuaaaugcuauucugguggguccagacugccacauaggauuuaagcaacucauaagcaa
AGTAAAGAAGTCTCACATTGGAAG 0.4 70 +/- 8% - 30 30 chr2_1081 0 0 yes - - - - uccgcuugagauggacuca uccgcuugagauggacucacacuugagggggagauuguugggaauucaagugugaguaaagaagucucacauuggaag
ATCGGATTTGGGGATTGAAAAACC 1.9 85 +/- 8% - 56 56 chr2_135 0 0 yes - - - - uucggauuuuuuuuacugaauccgauca uucggauuuuuuuuacugaauccgaucaccuucgguucggguaucggauuuggggauugaaaaacc
ATGAGTTCTTAACCATTGAAGGGG 0.4 70 +/- 8% - 33 33 chr2_9456 0 0 yes - - - - ccaauguaagguucuuaguucuuauuu ccaauguaagguucuuaguucuuauuuuuuaguuaagaacuaaaaaaugaguucuuaaccauugaagggg
ATGGAGGAGGGAGATGACCGTTGG 0.9 70 +/- 8% - 184 184 chr2_2768 0 0 yes - - - - agucaucaagcucucugaagaaa auggaggagggagaugaccguuggagccuuuuagagucacgugagaagcaugugacuuguccagucaucaagcucucugaagaaa
ATTAGCGACTGATTTAGCGACGGA 1.8 85 +/- 8% - 12 12 chr2_2438 0 0 yes - - - - cgucgcuaauucggucgcuaaguu auuagcgacugauuuagcgacggauauaguagcgacugaaauuuccgucgcuaauucggucgcuaaguu
CCTAAATTGGACCAATGGACCCGC 1.8 85 +/- 8% - 25 25 chr2_10579 0 0 yes - - - - ggguugcuucgggucuagggac ccuaaauuggaccaauggacccgcauaaugucggguugcuucgggucuagggac
CCTTTGAGGATGAGGCCTGCTC 1.5 85 +/- 8% - 72 72 chr2_6657 0 0 yes - - - - gcaggucuucuucuguagacgcu ccuuugaggaugaggccugcucgauuggcucuuucaacaauugaagagcagauugaagauuucucagcaggucuucuucuguagacgcu
CGAGGACTTAGATTTTACGGG 2.6 44 +/- 34% - 525 525 chr2_7835 0 0 yes - - - - cguaaaaucuaaguccucgcg cguaaaaucuaaguccucgcguuugaaaagugugugaaaauuaguccucuggcgaggaccugcuacacacacuuuuucaaacucgaggacuuagauuuuacggg
CGTGATTGTCCCGTCTTGCGAGAC 8.2 26 +/- 44% - 23 15 chr2_772 0 8 no - - - - ucuuucgagacguuauuaaguggc ucuuucgagacguuauuaaguggcagugugguggauauugucccacgugauugucccgucuugcgagac
CONSENSTS MATTRE SEQTENCE miRDeep2 score estimated probability that the miRNA candidate is a true positive rfam alert total read count mature read count provisional id loop read count star read count significant randfold p-value miRBase miRNA example miRBase miRNA with the same seed UCSC browser NCBI blastn consensus star sequence consensus precursor sequence
GAACCTTACATTGGAGATGCTCTA 0.5 70 +/- 8% - 10 10 chr2_2779 0 0 yes - - - - cagcaccuccaaugguaaaguucuu cagcaccuccaaugguaaaguucuuaguucuuaauucuuaacuccaaaauaagaacuaagaaccuuacauuggagaugcucua
GAACCTTACATTGGAGATGCTCTT 1.3 85 +/- 8% - 15 15 chr2_7280 0 0 yes - - - - cagcaccuccaaugguaaaguucuu cagcaccuccaaugguaaaguucuuaguucuuaguucuuaacuccaaaauaagaacuaagaaccuuacauuggagaugcucuu
GAACTGAGTTCTTAACTATTGGAG 1.1 85 +/- 8% - 56 56 chr2_7894 0 0 yes - - - - cuaaugcaagauuauuaguucuu cuaaugcaagauuauuaguucuuauuuuugaauuaagaacuaagaacugaguucuuaacuauuggag
GAAGCATGTGGTACCAAGTACAAC 0.7 70 +/- 8% - 153 109 chr2_10084 44 0 yes - - - - cauauuuggucacgcaguucgg cauauuuggucacgcaguucggccaaauugccuaccucugcggcuauagaguagcuauagcuccuuuguauuacuuguggcaugaagcaugugguaccaaguacaac
GATGGACAGGATAGGATAGGAGAC 0.9 70 +/- 8% - 94 94 chr2_1631 0 0 yes - - - - ucuauccuaacuccccccucag ucuauccuaacuccccccucaggauaacuuuuacacaugauggacaggauaggauaggagac
GGATTTAAGCAACTCATAAGCAA 1.9 85 +/- 8% - 73 73 chr2_1883 0 0 yes - - - - gcuuauuggguugcuuaaaugcua gcuuauuggguugcuuaaaugcuauucuggugggcccagacugccacaugggauuuaagcaacucauaagcaa
GGTAAGAACTAGGGGACATAAGGG 0.8 70 +/- 8% - 57 57 chr2_12522 0 0 yes - - - - cuucucgucccaaaggguuagcuca cuucucgucccaaaggguuagcucaagugguaagaacuaggggacauaaggg
TCAGGACATGATAGGATATGATAG 0.4 70 +/- 8% - 38 38 chr2_10111 0 0 yes - - - - aucauguuguguuauuuguuguuu ucaggacaugauaggauaugauaggauaauaaucauaucauguuguguuauuuguuguuu
TCTAAATTCATGCATCGGTTTCCG 1.9 85 +/- 8% - 18 18 chr2_7184 0 0 yes - - - - aaaaccgaugcaugaauuuagauu aaaaccgaugcaugaauuuagauuaagguuagucuaaauucaugcaucgguuuccg
TGACGGAACGGAACAGGACAGAAC 0 70 +/- 8% - 429 429 chr2_8583 0 0 yes - - - - uguguuugguaacuccaagucaau ugacggaacggaacaggacagaacagaaugaaacaugacaauaauguucuauguguuguguuugguaacuccaagucaau
TGAGTTATTTGGCTTCGGGTCGGG 1.2 85 +/- 8% - 70 39 chr2_8393 31 0 yes - - - - cggcccaucccacauauauauuu ugaguuauuuggcuucgggucgggucggguuugaguugacauucgggccacccggcccaucccacauauauauuu
TGGGATAAGTGGTTGTTTGACATG 0.5 70 +/- 8% - 59 59 chr2_8088 0 0 yes - - - - uuaaagugacccuuucccaac uuaaagugacccuuucccaacagcuuaaacuuuugggauaagugguuguuugacaug
TTAGATTTCGATCCTCATTGGAGA 0 70 +/- 8% - 22 22 chr2_11538 0 0 yes - - - - ucuaauaggggaucuuauuagguccaaau ucuaauaggggaucuuauuagguccaaaucuuaauuauuuuaagaucuuagauuucgauccucauuggaga
TTTACAACGGTTGTTAGAATAAGC 0.1 70 +/- 8% - 57 54 chr2_283 0 3 yes - - - - gggaauaugucugaugugaaaagu gggaauaugucugaugugaaaaguaauuaguaaacauuauuuacaacgguuguuagaauaagc
TTTACATGGTCGTTCACTATCAGT 2 44 +/- 34% - 7 4 chr2_11782 0 3 yes - - - - gaaugaaugaccaaaugaaauagc gaaugaaugaccaaaugaaauagccgaauguuuacauggucguucacuaucagu
TTTGGGTGTGGGATTGATTAAA 0.8 70 +/- 8% - 19 19 chr2_12200 0 0 yes - - - - guuucaccugaauuauaaaacc guuucaccugaauuauaaaaccuauuuagguuugggugugggauugauuaaa
